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<allow>
<principal>public</principal>
<permission>read</permission>
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</access>
<dataset>
<shortName>knb-lter-bnz.187.10</shortName>
<title>Ground cover and biomass projection photos for the BBC collapse scar</title>
<creator>
<individualName>
<givenName>Isla</givenName>
<surName>Myers-Smith</surName>
</individualName>
<!--No position recorded in Database ( pers/position when lead_contact=1 )-->
<address>
<deliveryPoint>405 CW Biological Sciences Building, Dept. Biological Sciences University of Alberta, , AB, T6G 2E9</deliveryPoint>
<city>Edmonton</city>
<administrativeArea>Aberta</administrativeArea>
<postalCode>T6G 2E9</postalCode>
<country>Canada</country>
</address>
<phone phonetype="voice">(780) 492-1295</phone>
<!--No fax info present in Database  ( pers/fax when lead_contact=1 )-->
<electronicMailAddress>myerssmi@ualberta.ca</electronicMailAddress>
<onlineUrl>http://www.ualberta.ca/~myerssmi/home.html</onlineUrl>
</creator>
<metadataProvider>
<organizationName>Bonanza Creek LTER</organizationName>
<positionName>Data Manager</positionName>
<address>
<deliveryPoint>Boreal Ecology Cooperative Research Unit </deliveryPoint>
<deliveryPoint>University of Alaska Fairbanks</deliveryPoint>
<deliveryPoint>P.O. Box 756780 </deliveryPoint>
<city>Fairbanks</city>
<administrativeArea>AK</administrativeArea>
<postalCode>99775</postalCode>
<country>USA</country>
</address>
<phone phonetype="voice">907-474-6364</phone>
<phone phonetype="fax">907-474-6251</phone>
<electronicMailAddress>jpdowning@alaska.edu</electronicMailAddress>
<onlineUrl>http://www.lter.uaf.edu</onlineUrl>
</metadataProvider>
<associatedParty>
<individualName>
<givenName>F.S.</givenName>
<givenName>Stuart</givenName>
<surName>Chapin</surName>
</individualName>
<positionName>Professor of Ecology</positionName>
<address>
<deliveryPoint>Department of Biology and Wildlife;  Institute of Arctic Biology:  University of Alaska Fairbanks 193 Arctic Health P.O. Box 757000</deliveryPoint>
<city>Fairbanks</city>
<administrativeArea>AK </administrativeArea>
<postalCode>99775</postalCode>
<country>United States</country>
</address>
<phone phonetype="voice">(907) 474-7922</phone>
<phone phonetype="fax">(907) 474-6967</phone>
<role>Associated investigator</role>
</associatedParty>
<associatedParty>
<individualName>
<givenName>Jennifer</givenName>
<givenName>W.</givenName>
<surName>Harden</surName>
</individualName>
<positionName>USGS, Adjunct Professor of Soil Science, University of Alaska Fairbanks</positionName>
<address>
<deliveryPoint>U.S. Geological Survey 345 Middlefield Road, MS 962</deliveryPoint>
<city>Menlo Park</city>
<administrativeArea>CA</administrativeArea>
<postalCode>94025</postalCode>
<country>United States</country>
</address>
<phone phonetype="voice">(650) 329-4949</phone>
<phone phonetype="fax">(650) 329-4920</phone>
<role>Associated investigator</role>
</associatedParty>
<associatedParty>
<individualName>
<givenName>A.</givenName>
<givenName>David</givenName>
<surName>McGuire</surName>
</individualName>
<positionName>Assistant Professor of Landscape Ecology</positionName>
<address>
<deliveryPoint>Alaska Cooperative Fish and Wildlife Research Unit University of Alaska  Fairbanks  Irving I Building</deliveryPoint>
<city>Fairbanks</city>
<administrativeArea>AK </administrativeArea>
<postalCode>99775</postalCode>
<country>United States</country>
</address>
<phone phonetype="voice">(907) 474-6242</phone>
<phone phonetype="fax">(907) 474-7872</phone>
<role>Associated investigator</role>
</associatedParty>
<pubDate>2005-11-12</pubDate>
<abstract>
<para>We used digital photographs to project the biomass over the growing season. This data set contains ground cover photos of plots from the center of the BBC collapse scar (0m) into the surrounding fire scar (30m) of the Survey Line Fire (burned in June-July 2001) for the growing seasons of 2003 and 2004.  Also included are ground cover photos of plots along the biomass transect used to create the projected biomass data.  
We calculated the percent cover of vegetation for the biomass and intensively monitored transects from digital photographs. Photographs were rectified to 10,000 x 10,000 pixels and a 20 x 20 grid was applied to the photograph. The percentage of each plant type was estimated in each grid cell. The percent cover was regressed against the measured dry biomass to project biomass for the intensively measured transect. We did not project moss biomass and instead assumed it to be the same for both transects. 
We projected the change in biomass over the growing season from the change in greenness determined from digital photographs. We chose five dates throughout the growing season with pictures of equal color saturation, focus and aspect. From these we estimated the percent photosynthetic biomass by selecting areas of green on the photograph and calculating the percentage of the total pixels made up by these areas. We estimated curves for the change in % green vegetation for 0, 6 m and the mean of the remaining distances along the transect (12, 18, 24, and 30 m), as these regions of the transect exhibited different patterns of greenness across the growing season of 2004. To estimate photosynthetic biomass over the growing season, we corrected the biomass estimates for the study transect to account for the change in green vegetation associated with growth and senescence
</para>
</abstract>
<keywordSet>
<keyword>biomass</keyword>
<keyword>ground cover</keyword>
<keywordThesaurus>Biogeochemistry</keywordThesaurus>
</keywordSet>
<intellectualRights>
<section>
<title>Access to Data</title>
<para>While metadata will be freely available to those requesting it, the data manager will assure that any restrictions on access to data sets in the database will be enforced. Data will not be released without proper permission first being obtained from the investigator who generated the data. </para>
</section>
<section>
<title>Use of data</title>
<para> Researchers should receive adequate acknowledgment for the use of their data by others and should be provided with copies of publications using their data. Users of data from the data base must be aware that data is not to be sold or redistributed.</para>
</section>
<section>
<title>Citing Bonanza Creek LTER Datasets</title>
<para>It is considered a matter of professional ethics to acknowledge the work of other scientists. Thus, the Data User will properly cite the Data Set in any publications or in the metadata of any derived data products that were produced using the Data Set. </para>
</section>
</intellectualRights>
<distribution id="distributionReference">
<online>
<url>http://www.lter.uaf.edu/data_detail.cfm?datafile_pkey=187</url>
</online>
</distribution>
<coverage>
<geographicCoverage id="geoReference">
<geographicDescription>Site information unavailable</geographicDescription>
<boundingCoordinates>
<westBoundingCoordinate>-148.3334833</westBoundingCoordinate>
<eastBoundingCoordinate>-148.3334833</eastBoundingCoordinate>
<northBoundingCoordinate>64.6408</northBoundingCoordinate>
<southBoundingCoordinate>64.6408</southBoundingCoordinate>
</boundingCoordinates>
</geographicCoverage>
<temporalCoverage>
<rangeOfDates>
<beginDate>
<calendarDate>2003-08-06</calendarDate>
</beginDate>
<endDate>
<calendarDate>2004-09-18</calendarDate>
</endDate>
</rangeOfDates>
</temporalCoverage>
</coverage>
<maintenance>
<description>
<section>
<title>Status</title>
<para>Completed</para>
</section>
</description>
</maintenance>
<contact>
<organizationName>Bonanza Creek LTER</organizationName>
<positionName>Data Manager</positionName>
<address>
<deliveryPoint>Boreal Ecology Cooperative Research Unit </deliveryPoint>
<deliveryPoint>University of Alaska Fairbanks</deliveryPoint>
<deliveryPoint>P.O. Box 756780 </deliveryPoint>
<city>Fairbanks</city>
<administrativeArea>AK</administrativeArea>
<postalCode>99775</postalCode>
<country>USA</country>
</address>
<phone phonetype="voice">907-474-6364</phone>
<phone phonetype="fax">907-474-6251</phone>
<electronicMailAddress>jpdowning@alaska.edu</electronicMailAddress>
<onlineUrl>http://www.lter.uaf.edu</onlineUrl>
</contact>
<publisher>
<organizationName>Bonanza Creek LTER</organizationName>
<address>
<deliveryPoint>Boreal Ecology Cooperative Research Unit </deliveryPoint>
<deliveryPoint>University of Alaska Fairbanks</deliveryPoint>
<deliveryPoint>P.O. Box 756780 </deliveryPoint>
<city>Fairbanks</city>
<administrativeArea>AK</administrativeArea>
<postalCode>99775</postalCode>
<country>USA</country>
</address>
<phone phonetype="voice">907-474-6364</phone>
<phone phonetype="fax">907-474-6251</phone>
</publisher>
<pubPlace>Bonanza Creek LTER</pubPlace>
<methods>
<methodStep>
<description>
<section>
<title>Experimental Design</title>
<para>We used digital photographs to project the biomass over the growing season.</para>
</section>
<section>
<title>Methods</title>
<para>Pictures were taken on the east and west side of every point along the transect (0, 6, 12, 18, 24, and 30 m) at every visit to the site at the intensively monitored transect and once before harvest at the biomass transect.</para>
</section>
</description>
</methodStep>
<sampling>
<studyExtent>
<coverage>
<geographicCoverage>
<references>geoReference</references>
</geographicCoverage>
<temporalCoverage>
<rangeOfDates>
<beginDate>
<calendarDate>2003-08-06</calendarDate>
</beginDate>
<endDate>
<calendarDate>2004-09-18</calendarDate>
</endDate>
</rangeOfDates>
</temporalCoverage>
</coverage>
</studyExtent>
<samplingDescription>
<section>
<title>Sampling Frequency</title>
<para>bi-weekly</para>
</section>
</samplingDescription>
</sampling>
</methods>
<dataTable>
<entityName>biomass_photos.zip</entityName>
<!--No data table description found (df_loc/df_desc)-->
<physical>
<objectName>biomass_photos.zip</objectName>
<dataFormat>
<textFormat>
<numHeaderLines>1</numHeaderLines>
<recordDelimiter>\n</recordDelimiter>
<physicalLineDelimiter>\n</physicalLineDelimiter>
<attributeOrientation>column</attributeOrientation>
<simpleDelimited>
<fieldDelimiter>\t</fieldDelimiter>
</simpleDelimited>
</textFormat>
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<distribution>
<online>
<url>http://metacat.lternet.edu/das/dataAccessServlet?docid=knb-lter-bnz..&amp;urlTail=/ascii/files/biomass_photos.zip</url>
</online>
</distribution>
</physical>
<attributeList>
<attribute>
<attributeName>DOY</attributeName>
<attributeLabel>DOY</attributeLabel>
<attributeDefinition>Day of year of measurement</attributeDefinition>
<storageType>integer</storageType>
<measurementScale>
<dateTime>
<formatString>DOY</formatString>
</dateTime>
</measurementScale>
<missingValueCode>
<code>-9999</code>
<codeExplanation>Missing Value</codeExplanation>
</missingValueCode>
</attribute>
<attribute>
<attributeName>Distance</attributeName>
<attributeLabel>Distance</attributeLabel>
<attributeDefinition>Distance along the transect (0-30m)</attributeDefinition>
<storageType>float</storageType>
<measurementScale>
<nominal>
<nonNumericDomain>
<textDomain>
<definition>Distance along the transect (0-30m)</definition>
</textDomain>
</nonNumericDomain>
</nominal>
</measurementScale>
<missingValueCode>
<code>-9999</code>
<codeExplanation>Missing Value</codeExplanation>
</missingValueCode>
</attribute>
<attribute>
<attributeName>Side of Transect</attributeName>
<attributeLabel>Side of Transect</attributeLabel>
<attributeDefinition>Side of the transect (East or West)</attributeDefinition>
<storageType>string</storageType>
<measurementScale>
<nominal>
<nonNumericDomain>
<textDomain>
<definition>Side of the transect (East or West)</definition>
</textDomain>
</nonNumericDomain>
</nominal>
</measurementScale>
<missingValueCode>
<code>-9999</code>
<codeExplanation>Missing Value</codeExplanation>
</missingValueCode>
</attribute>
<attribute>
<attributeName>Projected Total Biomass (g/m2)</attributeName>
<attributeLabel>Projected Total Biomass (g/m2)</attributeLabel>
<attributeDefinition>Total plant biomass projected using the vegetation greeness determined from digital photos and biomass projections for distances along the transect that was not destructively harvested (in g per m2)</attributeDefinition>
<storageType>float</storageType>
<measurementScale>
<ratio>
<unit>
<standardUnit>gramsPerSquareMeter</standardUnit>
</unit>
<numericDomain>
<numberType>real</numberType>
<!--No minimum value recorded in database (datafilevaribles/minvalid)-->
</numericDomain>
</ratio>
</measurementScale>
<missingValueCode>
<code>-9999</code>
<codeExplanation>Missing Value</codeExplanation>
</missingValueCode>
</attribute>
</attributeList>
</dataTable>
<dataTable>
<entityName>biomass_projection_data.txt</entityName>
<!--No data table description found (df_loc/df_desc)-->
<physical>
<objectName>biomass_projection_data.txt</objectName>
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<textFormat>
<numHeaderLines>1</numHeaderLines>
<recordDelimiter>\n</recordDelimiter>
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<attributeOrientation>column</attributeOrientation>
<simpleDelimited>
<fieldDelimiter>\t</fieldDelimiter>
</simpleDelimited>
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<distribution>
<online>
<url>http://metacat.lternet.edu/das/dataAccessServlet?docid=knb-lter-bnz..&amp;urlTail=/ascii/files/biomass_photos.zip</url>
</online>
</distribution>
</physical>
<attributeList>
<attribute>
<attributeName>DOY</attributeName>
<attributeLabel>DOY</attributeLabel>
<attributeDefinition>Day of year of measurement</attributeDefinition>
<storageType>integer</storageType>
<measurementScale>
<dateTime>
<formatString>DOY</formatString>
</dateTime>
</measurementScale>
<missingValueCode>
<code>-9999</code>
<codeExplanation>Missing Value</codeExplanation>
</missingValueCode>
</attribute>
<attribute>
<attributeName>Distance</attributeName>
<attributeLabel>Distance</attributeLabel>
<attributeDefinition>Distance along the transect (0-30m)</attributeDefinition>
<storageType>float</storageType>
<measurementScale>
<nominal>
<nonNumericDomain>
<textDomain>
<definition>Distance along the transect (0-30m)</definition>
</textDomain>
</nonNumericDomain>
</nominal>
</measurementScale>
<missingValueCode>
<code>-9999</code>
<codeExplanation>Missing Value</codeExplanation>
</missingValueCode>
</attribute>
<attribute>
<attributeName>Side of Transect</attributeName>
<attributeLabel>Side of Transect</attributeLabel>
<attributeDefinition>Side of the transect (East or West)</attributeDefinition>
<storageType>string</storageType>
<measurementScale>
<nominal>
<nonNumericDomain>
<textDomain>
<definition>Side of the transect (East or West)</definition>
</textDomain>
</nonNumericDomain>
</nominal>
</measurementScale>
<missingValueCode>
<code>-9999</code>
<codeExplanation>Missing Value</codeExplanation>
</missingValueCode>
</attribute>
<attribute>
<attributeName>Projected Total Biomass (g/m2)</attributeName>
<attributeLabel>Projected Total Biomass (g/m2)</attributeLabel>
<attributeDefinition>Total plant biomass projected using the vegetation greeness determined from digital photos and biomass projections for distances along the transect that was not destructively harvested (in g per m2)</attributeDefinition>
<storageType>float</storageType>
<measurementScale>
<ratio>
<unit>
<standardUnit>gramsPerSquareMeter</standardUnit>
</unit>
<numericDomain>
<numberType>real</numberType>
<!--No minimum value recorded in database (datafilevaribles/minvalid)-->
</numericDomain>
</ratio>
</measurementScale>
<missingValueCode>
<code>-9999</code>
<codeExplanation>Missing Value</codeExplanation>
</missingValueCode>
</attribute>
</attributeList>
</dataTable>
</dataset>
<additionalMetadata>
<metadata>
<unitList>
<unit id="DOY"/>
</unitList>
</metadata>
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